I found it!!!! So the problem is not that any combination of wards of any ward specifically that is causing this bug but the amount of wards up. The magic number is 11. If I cast 11 wards before I cast any of the Flame Weapon, Holy Sword and or Bless weapon after that they will not trigger at all. The only exception I have found to that is that Bless weapon will trigger eventually if it is the 12th spell cast but not if 13th or higher......Also when the weapon is enchanted with any of the three it blinks in and out as if not working then working again. Following are the screen shots to prove what I am saying. It was a long process and I was quite frustrated until I figured it out. The quick answer to this problem is to cast those particular three spells long before the 11th ward you have up and then you only get them for the 15 minutes they last and can not cast them again until you rest or drop other wards to get down below 11 wards on you. Which this is of course not a solution but a band aid at first.
So the next five pictures show how the damages that were on when on blinked in and out occasionally. These are also time lapse as I was pressing the screen shot button in order as it happened.
Okay the next set of screen shots show how Flame weapon was the 11th spell cast so was on weapon but Bless was 12th and Holy Sword 13th. Bless did eventually trigger as the 12th spell cast in these screen shots.

///This one shows order of wards see where Bless is in the middle of flame weapon and holy sword. I cast Flame weapon as the 11th ward and it stuck just fine. Bless was the 12th ward and did not fire at first. It eventually did. Holy sword never did fire at that point of warding past 11 wards.
///These two showed that Bless weapon was not firing at first but then did come up. Holy sword never did fire at all
The last two show how I put Holy sword at the 11th ward and it fired just fine but neither flame weapon or bless would fire at the 12th ward for flame weapon and 13th ward for Bless weapon.
///Shows order of wards. Notice Holy sword at 11th ward cast and it does indeed enchant to the weapon but flame weapon and bless did not
///Shows how holy sword did indeed work at the 11th ward but flame weapon and bless did not ever trigger.
This concludes what I could find. Might want to try and reproduce it but I am 100% positive this is the issue I just do not know what script is telling it to do that and how to fix it.